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Protein Ontology report - collagen alpha-1(VI) chain (human)
PR:P12109 - http://purl.obolibrary.org/obo/PR_P12109
 
  Protein Forms      
Ontology Information Show OBO stanza / GPI
  PRO ID
PR:P12109   
  PRO namecollagen alpha-1(VI) chain (human) 
  Synonyms
PRO-Short-label: EXACT:hCOL6A1
Gene-based: RELATED:COL6A1
  Definition"A collagen alpha-1(VI) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P12109] 
  PRO Categoryorganism-gene 
  ParentPR:000003353 collagen alpha-1(VI) chain
PR:000029067 Homo sapiens protein
  Gene TemplateHGNC:2211 COL6A1 (human)
  TaxonNCBITaxon:9606 Homo sapiens
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene0                                                  Organism-Gene 1                                        
         Sequence0                                                  Organism-Sequence 1                                        
         Modification0                                                  Organism-Modification 15                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
UniProtKB:P12109
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Protein Forms Switch to Compact View   

Category  
PRO ID
Name
Short Name
Definition
Ann. Has Annotation?

Comp. In Complex?
organism-gene


PR:P12109
collagen alpha-1(VI) chain (human)
hCOL6A1
"A collagen alpha-1(VI) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P12109]

organism-sequence


PR:P12109-1
collagen alpha-1(VI) chain isoform 1 (human)
hCOL6A1/iso:1
"A collagen alpha-1(VI) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]

organism-modification


PR:000046961
collagen alpha-1(VI) chain, signal peptide removed form (human)
hCOL6A1/SigPep-
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed. UniProtKB:P12109, 20-1028." [PRO:DNx, Reactome:R-HSA-1614453, Reactome:R-HSA-2127512]

organism-modification


PR:000046964
collagen alpha-1(VI) chain, signal peptide removed 5-hydroxy-lysine form (human)
hCOL6A1/SigPep-/5HyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:P12109, 20-1028, MOD:00037." [PRO:DNx, Reactome:R-HSA-2022997, Reactome:R-HSA-2127519]

organism-modification


PR:000060407
collagen alpha-1(VI) chain, signal peptide removed galactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/GalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one galactosylhydroxylated lysine. UniProtKB:P12109, 20-1028, MOD:01914." [PRO:DNx, Reactome:R-HSA-2023521, Reactome:R-HSA-2127523]

organism-modification


PR:000060745
collagen alpha-1(VI) chain, signal peptide removed glucosylgalactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/GlcGalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one glucosylgalactosylhydroxylated lysine. UniProtKB:P12109, 20-1028, MOD:00162." [PRO:DNx, Reactome:R-HSA-2023608, Reactome:R-HSA-2127486]

organism-modification


PR:000046962
collagen alpha-1(VI) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline(3+) form (human)
hCOL6A1/SigPep-/3hP4hP(3+)
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00038|MOD:00039(3+)." [PRO:DNx, Reactome:R-HSA-2022507, Reactome:R-HSA-2127484]

organism-modification


PR:000046963
collagen alpha-1(VI) chain, signal peptide removed 4-hydroxy-proline(3+) form (human)
hCOL6A1/SigPep-/4HyPro(3+)
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00039(3+)." [PRO:DNx, Reactome:R-HSA-2022508, Reactome:R-HSA-2127464]

organism-modification


PR:000046964
collagen alpha-1(VI) chain, signal peptide removed 5-hydroxy-lysine form (human)
hCOL6A1/SigPep-/5HyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:P12109, 20-1028, MOD:00037." [PRO:DNx, Reactome:R-HSA-2022997, Reactome:R-HSA-2127519]

organism-modification


PR:000046965
collagen alpha-1(VI) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline(3+) form (human)
hCOL6A1/SigPep-/5hL3hP4hP(3+)
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00037|MOD:00038|MOD:00039(3+)." [PRO:DNx, Reactome:R-HSA-2022944, Reactome:R-HSA-2127527]

organism-modification


PR:000046966
collagen alpha-1(VI) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline(3+) form (human)
hCOL6A1/SigPep-/5hL4hP(3+)
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00037|MOD:00039(3+)." [PRO:DNx, Reactome:R-HSA-2022965, Reactome:R-HSA-2127506]

organism-modification


PR:000054955
collagen alpha-1(VI) chain O-glycosylated 1 (human)
hCOL6A1/OGlyco:1
"A collagen alpha-1(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-701 of the amino acid sequence represented by UniProtKB:P12109-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12109-1, Thr-701, MOD:00005~GNO:G43417UB." [GlyGen:P12109-1, PMID:30459171, PRO:DNx]

organism-modification


PR:000054956
collagen alpha-1(VI) chain O-glycosylated 2 (human)
hCOL6A1/OGlyco:2
"A collagen alpha-1(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-703 of the amino acid sequence represented by UniProtKB:P12109-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12109-1, Thr-703, MOD:00005~GNO:G43417UB." [GlyGen:P12109-1, PMID:30459171, PRO:DNx]

organism-modification


PR:000060314
collagen alpha-1(VI) chain, signal peptide removed 3-hydroxy-proline, 4-hydroxy-proline(3+), and galactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/3HyPro4HyPro(3+)GalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline, at least one galactosylhydroxylated lysine, and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00038|MOD:00039(3+)|MOD:01914." [PRO:DNx, Reactome:R-HSA-2023560, Reactome:R-HSA-2127538]

organism-modification


PR:000060407
collagen alpha-1(VI) chain, signal peptide removed galactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/GalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one galactosylhydroxylated lysine. UniProtKB:P12109, 20-1028, MOD:01914." [PRO:DNx, Reactome:R-HSA-2023521, Reactome:R-HSA-2127523]

organism-modification


PR:000060745
collagen alpha-1(VI) chain, signal peptide removed glucosylgalactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/GlcGalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one glucosylgalactosylhydroxylated lysine. UniProtKB:P12109, 20-1028, MOD:00162." [PRO:DNx, Reactome:R-HSA-2023608, Reactome:R-HSA-2127486]

organism-modification


PR:000061412
collagen alpha-1(VI) chain, signal peptide removed 4-hydroxy-proline(3+) and galactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/4HyPro(3+)GalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one galactosylhydroxylated lysine and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00039(3+)|MOD:01914." [PRO:DNx, Reactome:R-HSA-2023576, Reactome:R-HSA-2127501]

organism-modification


PR:000062386
collagen alpha-1(VI) chain, signal peptide removed 4-hydroxy-proline(3+) and glucosylgalactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/4HyPro(3+)GlcGalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one glucosylgalactosylhydroxylated lysine and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00039(3+)|MOD:00162." [PRO:DNx, Reactome:R-HSA-2023651, Reactome:R-HSA-2127524]

organism-modification


PR:000063862
collagen alpha-1(VI) chain, signal peptide removed 3-hydroxy-proline, 4-hydroxy-proline(3+), and glucosylgalactosylhydroxylysine-containing form (human)
hCOL6A1/SigPep-/3HyPro4HyPro(3+)GlcGalHyLys+
"A collagen alpha-1(VI) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline, at least one glucosylgalactosylhydroxylated lysine, and at least three 4-hydroxy-prolines. UniProtKB:P12109, 20-1028, MOD:00038|MOD:00039(3+)|MOD:00162." [PRO:DNx, Reactome:R-HSA-2023660, Reactome:R-HSA-2127522]

organism-modification


PR:000076038
collagen alpha-1(VI) chain deaminated 1 (human)
hCOL6A1/Deam:1
"A collagen alpha-1(VI) chain (human) that has been deaminated on the residue at the position equivalent to Asn-896 of the amino acid sequence represented by UniProtKB:P12109. UniProtKB:P12109, Asn-896, MOD:00684." [IEDB_epitope:1978833, PRO:DNx]