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Protein Ontology report - collagen alpha-1(II) chain (rat)
PR:P05539 - http://purl.obolibrary.org/obo/PR_P05539
 
  Protein Forms      
Ontology Information Show OBO stanza / GPI
  PRO ID
PR:P05539   
  PRO namecollagen alpha-1(II) chain (rat) 
  Synonyms
PRO-Short-label: EXACT:rCOL2A1
Gene-based: RELATED:Col2a1
Other: EXACT:alpha-1 type II collagen (rat)
  Definition"A collagen type II alpha chain that is encoded in the genome of rat." [OMA:P05539, PRO:DNx] 
  PRO Categoryorganism-gene 
  ParentPR:000003266 collagen type II alpha chain
PR:000029033 Rattus norvegicus protein
  Gene TemplateRGD:2375 Col2a1 (rat)
  TaxonNCBITaxon:10116 Rattus norvegicus
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene0                                                  Organism-Gene 1                                        
         Sequence0                                                  Organism-Sequence 0                                        
         Modification0                                                  Organism-Modification 4                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
UniProtKB:P05539
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
organism-gene



PR:P05539

collagen alpha-1(II) chain (rat)

rCOL2A1


"A collagen type II alpha chain that is encoded in the genome of rat." [OMA:P05539, PRO:DNx]


organism-modification



PR:000071420

collagen alpha-1(II) chain hydroxylated 1 (rat)

rCOL2A1/Hy:1


"A collagen alpha-1(II) chain (rat) that has been hydroxylated on the residue at the position equivalent to Pro-636 of the amino acid sequence represented by UniProtKB:P05539. UniProtKB:P05539, Pro-636, MOD:00678." [IEDB_epitope:109534, PRO:DNx]


organism-modification



PR:000072250

collagen alpha-1(II) chain hydroxylated 2 (rat)

rCOL2A1/Hy:2


"A collagen alpha-1(II) chain (rat) that has been hydroxylated on the residue at the position equivalent to Lys-396 of the amino acid sequence represented by UniProtKB:P05539. UniProtKB:P05539, Lys-396, MOD:00681." [IEDB_epitope:107851, IEDB_epitope:109312, IEDB_epitope:137871, IEDB_epitope:187148, PRO:DNx]


organism-modification



PR:000076855

collagen alpha-1(II) chain hydroxylated 3 (rat)

rCOL2A1/Hy:3


"A collagen alpha-1(II) chain (rat) that has been hydroxylated on the residue at the position equivalent to Lys-395 of the amino acid sequence represented by UniProtKB:P05539. UniProtKB:P05539, Lys-395, MOD:00681." [IEDB_epitope:108386, PRO:DNx]


organism-modification



PR:000082896

collagen alpha-1(II) chain hydroxylated 4 (rat)

rCOL2A1/Hy:4


"A collagen alpha-1(II) chain (rat) that has been hydroxylated on the residue at the position equivalent to Pro-498 of the amino acid sequence represented by UniProtKB:P05539. UniProtKB:P05539, Pro-498, MOD:00678." [IEDB_epitope:108796, PRO:DNx]