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Protein Ontology report - ubiquitin
PR:000035728 - http://purl.obolibrary.org/obo/PR_000035728
 
  Protein Forms  Complex      
Ontology Information Show OBO stanza
  PRO ID
PR:000035728   
  PRO nameubiquitin 
  Synonyms
PRO-Short-label: EXACT:Ubiq
  Definition"A proteolytic cleavage product that gives rise to a protein that corresponds to the stand-alone version of the Ubiquitin (Pfam:PF00240) domain. Example: UniProtKB:P0CG48, 1-76." [Pfam:PF00240
  PRO Categoryunion 
  ParentPR:000018264 proteolytic cleavage product
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
union



PR:000035728

ubiquitin

Ubiq


"A proteolytic cleavage product that gives rise to a protein that corresponds to the stand-alone version of the Ubiquitin (Pfam:PF00240) domain. Example: UniProtKB:P0CG48, 1-76." [Pfam:PF00240]


organism-modification



PR:000050249

ubiquitin (human)

hUbiq


"A ubiquitin in human. Example: UniProtKB:P0CG47, 1-76." [PRO:DAN, Reactome:R-HSA-113595]


organism-polymer



PR:000050248

polyubiquitin (human)

hpolyUbiq


"A polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689096, Reactome:R-HSA-6782682, Reactome:R-HSA-6783021]


organism-polymer



PR:000035732

K63-polyubiquitin (human)

hK63polyUbiq


"A K63-polyubiquitin in human." [Reactome:R-HSA-450152, Reactome:R-HSA-5682839, Reactome:R-HSA-6782513]


Yes
organism-polymer



PR:000050237

K48-polyubiquitin (human)

hK48polyUbiq


"A K48-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-48, MOD:01148." [PRO:DAN, Reactome:R-HSA-912740]


organism-polymer



PR:000050239

K6-polyubiquitin (human)

hK6polyUbiq


"A K6-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-6, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689106]


organism-polymer



PR:000050241

K11-polyubiquitin (human)

hK11polyUbiq


"A K11-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-11, MOD:01148." [PRO:DAN, Reactome:R-HSA-3095921]


organism-polymer



PR:000050243

K27-polyubiquitin (human)

hK27polyUbiq


"A K27-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-27, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689212]


organism-polymer



PR:000050245

K29-polyubiquitin (human)

hK29polyUbiq


"A K29-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-29, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689192]


organism-polymer



PR:000050247

K33-polyubiquitin (human)

hK33polyUbiq


"A K33-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-33, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689142]


union



PR:000060230

K48- or K63-linked polyubiquitin (human)

h[K48/K63]-polyUbiq


"A polyubiquitin (human) that is either K48-linked or K63-linked." [PRO:DAN]


organism-polymer



PR:000035732

K63-polyubiquitin (human)

hK63polyUbiq


"A K63-polyubiquitin in human." [Reactome:R-HSA-450152, Reactome:R-HSA-5682839, Reactome:R-HSA-6782513]


organism-polymer



PR:000050237

K48-polyubiquitin (human)

hK48polyUbiq


"A K48-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-48, MOD:01148." [PRO:DAN, Reactome:R-HSA-912740]


organism-polymer



PR:000060229

monoubiquitin (human)

hmonoUbiq


"A ubiquitin (human) that is a monomer." [PRO:DAN]


organism-modification



PR:000060218

ubiquitin (mouse)

mUbiq


"A ubiquitin in mouse. Example: UniProtKB:P0CG49, 1-76." [PRO:DAN]


organism-polymer



PR:000036039

K63-polyubiquitin (mouse)

mK63polyUbiq


"A K63-polyubiquitin in mouse." [PRO:CNA]


modification



PR:000035716

ubiquitin (RPS27A)

RPS27A/Clv:ubiq


"A ubiquitin-ribosomal protein eS31 fusion protein that has been processed by proteolytic cleavage. This form is the N-terminal region consisting of the Ubiquitin (Pfam:PF00240) domain. Example: UniProtKB:P62979, 1-76." [PMID:124018, PRO:CNA]


organism-modification



PR:000035717

ubiquitin (RPS27A) (human)

hRPS27A/Clv:ubiq


"A ubiquitin (RPS27A) in human. UniProtKB:P62979, 1-76." [PMID:124018, PRO:CNA]


organism-modification



PR:000059717

ubiquitin (RPS27A) (mouse)

mRPS27A/Clv:ubiq


"A ubiquitin (RPS27A) in mouse. UniProtKB:P62983, 1-76." [PRO:DAN]


modification



PR:000035720

ubiquitin (UBC)

UBC/Clv:ubiq


"A polyubiquitin-C that has been processed by proteolytic cleavage to produce a protein consisting of a Ubiquitin (Pfam:PF00240) domain. There are nine copies of ubiquitin in polyubiquitin C. Example: UniProtKB:P0CG48, (1-76) or (77-152) or (153-228) or (229-304) or (305-380) or (381-456) or (457-532) or (533-608) or (609-684)." [PRO:CNA]


organism-modification



PR:000035721

ubiquitin (UBC) (mouse)

mUBC/Clv:ubiq


"A ubiquitin (UBC) in mouse. UniProtKB:P0CG50, (1-76) or (77-152) or (153-228) or (229-304) or (305-380) or (381-456) or (457-532) or (533-608) or (609-684) or (685-734)." [PRO:DAN]


modification



PR:000035722

ubiquitin (UBA52)

UBA52/Clv:ubiq


"A ubiquitin-ribosomal protein eL40 fusion protein that has been processed by proteolytic cleavage. This form is the N-terminal region consisting of the Ubiquitin (Pfam:PF00240) domain. Example: UniProtKB:P62987, 1-76." [PRO:CNA]


organism-modification



PR:000035723

ubiquitin (UBA52) (human)

hUBA52/Clv:ubiq


"A ubiquitin (UBA52) in human. UniProtKB:P62987, 1-76." [PRO:CNA]


organism-modification



PR:000060216

ubiquitin (UBA52) (mouse)

mUBA52/Clv:ubiq


"A ubiquitin (UBA52) in mouse. UniProtKB:P62984, 1-76." [PRO:DAN]


modification



PR:000035726

ubiquitin (UBB)

UBB/Clv:ubiq


"A polyubiquitin-B that has been processed by proteolytic cleavage to produce a protein consisting of a Ubiquitin (Pfam:PF00240) domain. There are three copies of ubiquitin in polyubiquitin B. Example: UniProtKB:P0CG47, (1-76) or (77-152) or (153-228)." [PRO:CNA]


organism-modification



PR:000035727

ubiquitin (UBB) (human)

hUBB/Clv:ubiq


"A ubiquitin (UBB) in human. UniProtKB:P0CG47, (1-76) or (77-152) or (153-228)." [PRO:CNA]


organism-modification



PR:000060217

ubiquitin (UBB) (mouse)

mUBB/Clv:ubiq


"A ubiquitin (UBB) in mouse. UniProtKB:P0CG49, (1-76) or (77-152) or (153-228)." [PRO:CNA]


polymer



PR:000050235

polyubiquitin

polyUbiq


"A ubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation. Example: UniProtKB:P0CG47, 1-76, MOD:01148." [PRO:DAN]


polymer



PR:000035731

K63-polyubiquitin

K63polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-63." [PMID:15556404]


organism-polymer



PR:000035732

K63-polyubiquitin (human)

hK63polyUbiq


"A K63-polyubiquitin in human." [Reactome:R-HSA-450152, Reactome:R-HSA-5682839, Reactome:R-HSA-6782513]


Yes
organism-polymer



PR:000036039

K63-polyubiquitin (mouse)

mK63polyUbiq


"A K63-polyubiquitin in mouse." [PRO:CNA]


modification



PR:000049734

K63-diubiquitin

K63diUbiq


"A polyubiquitin that is a dimer formed through ubiquitin-ubiquitin conjugation via Lys-63." [PMID:27151298]


organism-polymer



PR:000050248

polyubiquitin (human)

hpolyUbiq


"A polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689096, Reactome:R-HSA-6782682, Reactome:R-HSA-6783021]


organism-polymer



PR:000035732

K63-polyubiquitin (human)

hK63polyUbiq


"A K63-polyubiquitin in human." [Reactome:R-HSA-450152, Reactome:R-HSA-5682839, Reactome:R-HSA-6782513]


Yes
organism-polymer



PR:000050237

K48-polyubiquitin (human)

hK48polyUbiq


"A K48-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-48, MOD:01148." [PRO:DAN, Reactome:R-HSA-912740]


organism-polymer



PR:000050239

K6-polyubiquitin (human)

hK6polyUbiq


"A K6-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-6, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689106]


organism-polymer



PR:000050241

K11-polyubiquitin (human)

hK11polyUbiq


"A K11-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-11, MOD:01148." [PRO:DAN, Reactome:R-HSA-3095921]


organism-polymer



PR:000050243

K27-polyubiquitin (human)

hK27polyUbiq


"A K27-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-27, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689212]


organism-polymer



PR:000050245

K29-polyubiquitin (human)

hK29polyUbiq


"A K29-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-29, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689192]


organism-polymer



PR:000050247

K33-polyubiquitin (human)

hK33polyUbiq


"A K33-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-33, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689142]


union



PR:000060230

K48- or K63-linked polyubiquitin (human)

h[K48/K63]-polyUbiq


"A polyubiquitin (human) that is either K48-linked or K63-linked." [PRO:DAN]


organism-polymer



PR:000035732

K63-polyubiquitin (human)

hK63polyUbiq


"A K63-polyubiquitin in human." [Reactome:R-HSA-450152, Reactome:R-HSA-5682839, Reactome:R-HSA-6782513]


organism-polymer



PR:000050237

K48-polyubiquitin (human)

hK48polyUbiq


"A K48-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-48, MOD:01148." [PRO:DAN, Reactome:R-HSA-912740]


polymer



PR:000050236

K48-polyubiquitin

K48polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-48. Example: UniProtKB:P0CG47, 1-76, Lys-48, MOD:01148." [PRO:DAN]


organism-polymer



PR:000050237

K48-polyubiquitin (human)

hK48polyUbiq


"A K48-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-48, MOD:01148." [PRO:DAN, Reactome:R-HSA-912740]


polymer



PR:000050238

K6-polyubiquitin

K6polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-6. Example: UniProtKB:P0CG47, 1-76, Lys-6, MOD:01148." [PRO:DAN]


organism-polymer



PR:000050239

K6-polyubiquitin (human)

hK6polyUbiq


"A K6-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-6, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689106]


polymer



PR:000050240

K11-polyubiquitin

K11polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-11. Example: UniProtKB:P0CG47, 1-76, Lys-11, MOD:01148." [PRO:DAN]


organism-polymer



PR:000050241

K11-polyubiquitin (human)

hK11polyUbiq


"A K11-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-11, MOD:01148." [PRO:DAN, Reactome:R-HSA-3095921]


polymer



PR:000050242

K27-polyubiquitin

K27polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-27. Example: UniProtKB:P0CG47, 1-76, Lys-27, MOD:01148." [PRO:DAN]


organism-polymer



PR:000050243

K27-polyubiquitin (human)

hK27polyUbiq


"A K27-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-27, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689212]


polymer



PR:000050244

K29-polyubiquitin

K29polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-29. Example: UniProtKB:P0CG47, 1-76, Lys-29, MOD:01148." [PRO:DAN]


organism-polymer



PR:000050245

K29-polyubiquitin (human)

hK29polyUbiq


"A K29-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-29, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689192]


polymer



PR:000050246

K33-polyubiquitin

K33polyUbiq


"A polyubiquitin that is a polymer formed through ubiquitin-ubiquitin conjugation via Lys-33. Example: UniProtKB:P0CG47, 1-76, Lys-33, MOD:01148." [PRO:DAN]


organism-polymer



PR:000050247

K33-polyubiquitin (human)

hK33polyUbiq


"A K33-polyubiquitin in human. Example: UniProtKB:P0CG47, 1-76, Lys-33, MOD:01148." [PRO:DAN, Reactome:R-HSA-5689142]


polymer



PR:000060228

monoubiquitin

monoUbiq


"A ubiquitin that is a monomer." [PRO:DAN]


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Ubiq forms found in complexes   

Ubiq Component
Complexes
PR:000035732 hK63polyUbiq PR:000035734 free K63-linked pUb:TAK1complex:pUbtraf6:ticam1:ticam2:activated TLR4 complex (human)
PR:000035738 free K63-linked pUb:activated TAK1 complex:pUbtraf6:ticam1:ticam2:activated TLR4 complex (human)
PR:000035740 free K63-linked pUb:activated TAK1 complex:pUbtraf6 complex (human)
PR:000037338 free K63-linked pUb:activated TAK1 complex:pUbtraf6:ticam1:activated TLR3 complex (human)
PR:000037342 free K63-linked pUb:TAK1complex:pUbtraf6:ticam1:activated TLR3 complex (human)