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RACE-PRO
PRO tracker
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Documentation
Protein Ontology report - transcription factor SOX-5 isoform 3
PR:000026782 -
http://purl.obolibrary.org/obo/PR_000026782
Protein Forms
Annotations
Ontology Information
Show OBO stanza
PRO ID
PR:000026782
PRO name
transcription factor SOX-5 isoform 3
Synonyms
PRO-Short-label
:
EXACT:
SOX5/iso:3
Definition
"A transcription factor SOX-5 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by
UniProtKB:P35710-3
or a 1:1 ortholog thereof." [PRO:HJD]
PRO Category
sequence
Parent
PR:000015431
transcription factor SOX-5
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Sequence
1
Organism-Sequence
1
Modification
0
Organism-Modification
0
Term Hierarchy
Visualization
DAG:
OLS:
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Protein Forms
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Extended View
Category
PRO Form Name
Short Name
Ann.
Has Annotation?
Comp.
In Complex?
sequence
PR:000026782
transcription factor SOX-5 isoform 3
SOX5/iso:3
organism-sequence
PR:P35710-3
transcription factor SOX-5 isoform 3 (mouse)
mSOX5/iso:3
Yes
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Functional Annotation (GO-centric view)
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PRO Centric View
Biological Process GO Term
Protein Forms & Complexes
Evidence
GO:0045944
positive regulation of transcription by RNA polymerase II
PR:P35710-3
mSOX5/iso:3
MGI_ref:4849623;
PMID:20668334
Molecular Function GO Term
Protein Forms & Complexes
Evidence
GO:0000976
transcription cis-regulatory region binding
PR:P35710-3
mSOX5/iso:3
MGI_ref:4849623;
PMID:20668334
Cellular Location GO Term
Protein Forms & Complexes
Evidence
GO:0005634
nucleus
PR:P35710-3
mSOX5/iso:3
MGI_ref:4849623;
PMID:20668334
