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Protein Ontology report - retinoic acid receptor alpha isoform 1
PR:000022009 - http://purl.obolibrary.org/obo/PR_000022009
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000022009   
  PRO nameretinoic acid receptor alpha isoform 1 
  Synonyms
PRO-Short-label: EXACT:RARA/iso:1
Other: EXACT:retinoic acid receptor isoform alpha-1
  Definition"A retinoic acid receptor alpha that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P11416-1 or a 1:1 ortholog thereof." [PRO:HJD] 
  PRO Categorysequence 
  ParentPR:000013736 retinoic acid receptor alpha
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Sequence1                                                  Organism-Sequence 2                                        
         Modification1                                                  Organism-Modification 2                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms  Switch to Extended View   

Category  
PRO Form Name
Short Name
Ann. Has Annotation?

Comp. In Complex?
sequence


PR:000022009 retinoic acid receptor alpha isoform 1
RARA/iso:1

organism-sequence


PR:P10276-1 retinoic acid receptor alpha isoform 1 (human)
hRARA/iso:1

organism-modification


PR:000026078 retinoic acid receptor alpha isoform 1 phosphorylated 1 (human)
hRARA/iso:1/Phos:1

organism-sequence


PR:P11416-1 retinoic acid receptor alpha isoform 1 (mouse)
mRARA/iso:1
Yes
organism-modification


PR:000026077 retinoic acid receptor alpha isoform 1 phosphorylated 1 (mouse)
mRARA/iso:1/Phos:1

modification


PR:000026076 retinoic acid receptor alpha isoform 1 phosphorylated 1
RARA/iso:1/Phos:1

organism-modification


PR:000026077 retinoic acid receptor alpha isoform 1 phosphorylated 1 (mouse)
mRARA/iso:1/Phos:1

organism-modification


PR:000026078 retinoic acid receptor alpha isoform 1 phosphorylated 1 (human)
hRARA/iso:1/Phos:1

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Functional Annotation (GO-centric view) Switch to PRO Centric View     

Biological Process GO Term
Protein Forms & Complexes
Evidence
GO:0000122 negative regulation of transcription by RNA polymerase IIPR:P11416-1 mRARA/iso:1 PMID:8152920
GO:0006355 regulation of DNA-templated transcriptionPR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
PR:P11416-1 mRARA/iso:1 PMID:12101409
GO:0045892 negative regulation of DNA-templated transcriptionPR:P11416-1 mRARA/iso:1 PMID:11641275
GO:0045947 negative regulation of translational initiationPR:P11416-1 mRARA/iso:1 MGI_ref:3803427; PMID:18495661

Molecular Function GO Term
Protein Forms & Complexes
Evidence
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA bindingPR:P11416-1 mRARA/iso:1 MGI_ref:3053708; PMID:1655807
GO:0003677 DNA bindingPR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
PR:P11416-1 mRARA/iso:1 PMID:15528198
GO:0003700 DNA-binding transcription factor activityPR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
PR:P11416-1 mRARA/iso:1 PMID:8152920
GO:0004879 nuclear receptor activityPR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
PR:P11416-1 mRARA/iso:1 PMID:15322135
GO:0005515 protein bindingPR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
PR:P11416-1 mRARA/iso:1 PMID:10531331
GO:0043565 sequence-specific DNA bindingPR:P11416-1 mRARA/iso:1 PMID:17928865

Cellular Location GO Term
Protein Forms & Complexes
Evidence
GO:0005634 nucleusPR:P11416-1 mRARA/iso:1 PMID:12079996
GO:0005737 cytoplasmPR:P11416-1 mRARA/iso:1 PMID:12079996
GO:0030425 dendritePR:P11416-1 mRARA/iso:1 MGI_ref:3803427; PMID:18495661
GO:0043025 neuronal cell bodyPR:P11416-1 mRARA/iso:1 MGI_ref:3803427; PMID:18495661