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Protein Ontology report - transcription factor SOX-5
PR:000015431 - http://purl.obolibrary.org/obo/PR_000015431
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000015431   
  PRO nametranscription factor SOX-5 
  Synonyms
PRO-Short-label: EXACT:SOX5
Gene-based: RELATED:Sox-5
  Definition"A protein that is a translation product of the human SOX5 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence3                                                  Organism-Sequence 10                                        
         Modification0                                                  Organism-Modification 0                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000015431

transcription factor SOX-5

SOX5


"A protein that is a translation product of the human SOX5 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:F1M8W4

transcription factor SOX-5 (rat)

rSOX5


"A transcription factor SOX-5 that is encoded in the genome of rat." [OMA:F1M8W4, PRO:DNx]


organism-sequence



PR:F1M8W4-1

transcription factor SOX-5 isoform r1 (rat)

rSOX5/iso:r1


"A transcription factor SOX-5 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:F1M8W4-1." [PRO:DNx, UniProtKB:F1M8W4]


organism-sequence



PR:F1M8W4-2

transcription factor SOX-5 isoform r2 (rat)

rSOX5/iso:r2


"A transcription factor SOX-5 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:F1M8W4-2." [PRO:DNx, UniProtKB:F1M8W4]


organism-gene



PR:P35710

transcription factor SOX-5 (mouse)

mSOX5


"A transcription factor SOX-5 that is encoded in the genome of mouse." [OMA:P35710, PRO:DNx]


organism-sequence



PR:P35710-1

transcription factor SOX-5 isoform 1 (mouse)

mSOX5/iso:1


"A transcription factor SOX-5 isoform 1 that is encoded in the genome of mouse." [PMID:9714725, PRO:HJD]


organism-sequence



PR:P35710-2

transcription factor SOX-5 isoform 2 (mouse)

mSOX5/iso:2


"A transcription factor SOX-5 isoform 2 that is encoded in the genome of mouse." [PMID:9755172, PRO:HJD]

Yes

organism-sequence



PR:P35710-3

transcription factor SOX-5 isoform 3 (mouse)

mSOX5/iso:3


"A transcription factor SOX-5 isoform 3 that is encoded in the genome of mouse." [PMID:1396566, PRO:HJD]

Yes

organism-gene



PR:P35711

transcription factor SOX-5 (human)

hSOX5


"A transcription factor SOX-5 that is encoded in the genome of human." [PRO:DNx, UniProtKB:P35711]


organism-sequence



PR:P35711-1

transcription factor SOX-5 isoform h1 (human)

hSOX5/iso:h1


"A transcription factor SOX-5 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35711-1." [PRO:DNx, UniProtKB:P35711]


organism-sequence



PR:P35711-2

transcription factor SOX-5 isoform h2 (human)

hSOX5/iso:h2


"A transcription factor SOX-5 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35711-2." [PRO:DNx, UniProtKB:P35711]


organism-sequence



PR:P35711-3

transcription factor SOX-5 isoform h3 (human)

hSOX5/iso:h3


"A transcription factor SOX-5 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35711-3." [PRO:DNx, UniProtKB:P35711]


organism-sequence



PR:P35711-4

transcription factor SOX-5 isoform h4 (human)

hSOX5/iso:h4


"A transcription factor SOX-5 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35711-4." [PRO:DNx, UniProtKB:P35711]


organism-sequence



PR:P35711-5

transcription factor SOX-5 isoform h5 (human)

hSOX5/iso:h5


"A transcription factor SOX-5 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35711-5." [PRO:DNx, UniProtKB:P35711]


sequence



PR:000026778

transcription factor SOX-5 isoform 1

SOX5/iso:1


"A transcription factor SOX-5 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35710-1 or a 1:1 ortholog thereof." [PRO:HJD]


organism-sequence



PR:P35710-1

transcription factor SOX-5 isoform 1 (mouse)

mSOX5/iso:1


"A transcription factor SOX-5 isoform 1 that is encoded in the genome of mouse." [PMID:9714725, PRO:HJD]


sequence



PR:000026780

transcription factor SOX-5 isoform 2

SOX5/iso:2


"A transcription factor SOX-5 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35710-2 or a 1:1 ortholog thereof." [PRO:HJD]


organism-sequence



PR:P35710-2

transcription factor SOX-5 isoform 2 (mouse)

mSOX5/iso:2


"A transcription factor SOX-5 isoform 2 that is encoded in the genome of mouse." [PMID:9755172, PRO:HJD]

Yes

sequence



PR:000026782

transcription factor SOX-5 isoform 3

SOX5/iso:3


"A transcription factor SOX-5 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P35710-3 or a 1:1 ortholog thereof." [PRO:HJD]


organism-sequence



PR:P35710-3

transcription factor SOX-5 isoform 3 (mouse)

mSOX5/iso:3


"A transcription factor SOX-5 isoform 3 that is encoded in the genome of mouse." [PMID:1396566, PRO:HJD]

Yes

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:P35710-2 mSOX5/iso:2 acts_upstream_of_or_withinGO:0045944 positive regulation of transcription by RNA polymerase II MGI_ref:1303256; PMID:9755172
enablesGO:0003677 DNA binding MGI_ref:1303256; PMID:9755172
GO:0046982 protein heterodimerization activity MGI_ref:1303256; PMID:9755172
located_inGO:0005634 nucleus MGI_ref:1303256; PMID:9755172
PR:P35710-3 mSOX5/iso:3 acts_upstream_of_or_withinGO:0045944 positive regulation of transcription by RNA polymerase II MGI_ref:4849623; PMID:20668334
enablesGO:0000976 transcription cis-regulatory region binding MGI_ref:4849623; PMID:20668334
located_inGO:0005634 nucleus MGI_ref:4849623; PMID:20668334