back to PRO homepage
  Home |   Linked Open Data |   Browse |  
Search

|   Statistics |   Download
 RACE-PRO
 PRO tracker
 Community
 PRO Consortium
 Publications
 Documentation

Protein Ontology report - mediator of RNA polymerase II transcription subunit 13
PR:000010284 - http://purl.obolibrary.org/obo/PR_000010284
 
  Protein Forms  Complex  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000010284   
  PRO namemediator of RNA polymerase II transcription subunit 13 
  Synonyms
PRO-Short-label: EXACT:MED13
Gene-based: RELATED:ARC250 | KIAA0593 | THRAP1 | TRAP240
Other: EXACT:activator-recruited cofactor 250 kDa component | DRIP250 | mediator complex subunit 13 | thyroid hormone receptor-associated protein 1 | thyroid hormone receptor-associated protein complex 240 kDa component | Trap240 | vitamin D3 receptor-interacting protein complex component DRIP250
  Definition"A protein that is a translation product of the human MED13 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence1                                                  Organism-Sequence 2                                        
         Modification0                                                  Organism-Modification 4                                        
  Term Hierarchy
  Visualization
DAG: OLS:
Back to top
Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000010284

mediator of RNA polymerase II transcription subunit 13

MED13


"A protein that is a translation product of the human MED13 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:Q5SWW4

mediator of RNA polymerase II transcription subunit 13 (mouse)

mMED13


"A mediator of RNA polymerase II transcription subunit 13 that is encoded in the genome of mouse." [OMA:Q5SWW4, PRO:DNx]


organism-sequence



PR:Q5SWW4-1

mediator of RNA polymerase II transcription subunit 13 isoform 1 (mouse)

mMED13/iso:1


"A mediator of RNA polymerase II transcription subunit 13 isoform 1 that is encoded in the genome of mouse." [PMID:16141072, PRO:HJD]

Yes

Yes
organism-gene



PR:Q7KTX8

mediator of RNA polymerase II transcription subunit 13 (fruit fly)

fly-MED13


"A mediator of RNA polymerase II transcription subunit 13 that is encoded in the genome of fruit fly." [PRO:DNx]


organism-gene



PR:Q9UHV7

mediator of RNA polymerase II transcription subunit 13 (human)

hMED13


"A mediator of RNA polymerase II transcription subunit 13 that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q9UHV7]


organism-sequence



PR:Q9UHV7-1

mediator of RNA polymerase II transcription subunit 13 isoform 1 (human)

hMED13/iso:1


"A mediator of RNA polymerase II transcription subunit 13 isoform 1 that is encoded in the genome of human." [PRO:HJD]


organism-modification



PR:000069812

mediator of RNA polymerase II transcription subunit 13 deaminated 1 (human)

hMED13/Deam:1


"A mediator of RNA polymerase II transcription subunit 13 (human) that has been deaminated on the residue at the position equivalent to Asn-872 of the amino acid sequence represented by UniProtKB:Q9UHV7. UniProtKB:Q9UHV7, Asn-872, MOD:00684." [IEDB_epitope:1854191, PRO:DNx]


organism-modification



PR:000069835

mediator of RNA polymerase II transcription subunit 13 deaminated 2 (human)

hMED13/Deam:2


"A mediator of RNA polymerase II transcription subunit 13 (human) that has been deaminated on the residue at the position equivalent to Gln-2108 of the amino acid sequence represented by UniProtKB:Q9UHV7. UniProtKB:Q9UHV7, Gln-2108, MOD:00685." [IEDB_epitope:1981255, PRO:DNx]


organism-modification



PR:000074958

mediator of RNA polymerase II transcription subunit 13 methylated 1 (human)

hMED13/Me:1


"A mediator of RNA polymerase II transcription subunit 13 (human) that has been methylated on the residue at the position equivalent to Cys-1957 of the amino acid sequence represented by UniProtKB:Q9UHV7. UniProtKB:Q9UHV7, Cys-1957, MOD:00660." [IEDB_epitope:1055466, PRO:DNx]


organism-modification



PR:000079200

mediator of RNA polymerase II transcription subunit 13 deaminated 3 (human)

hMED13/Deam:3


"A mediator of RNA polymerase II transcription subunit 13 (human) that has been deaminated on the residue at the position equivalent to Asn-125 of the amino acid sequence represented by UniProtKB:Q9UHV7. UniProtKB:Q9UHV7, Asn-125, MOD:00684." [IEDB_epitope:1352895, PRO:DNx]


sequence



PR:000028928

mediator of RNA polymerase II transcription subunit 13 isoform 1

MED13/iso:1


"A mediator of RNA polymerase II transcription subunit 13 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q5SWW4-1 or a 1:1 ortholog thereof." [PMID:16141072, PRO:HJD]


organism-sequence



PR:Q5SWW4-1

mediator of RNA polymerase II transcription subunit 13 isoform 1 (mouse)

mMED13/iso:1


"A mediator of RNA polymerase II transcription subunit 13 isoform 1 that is encoded in the genome of mouse." [PMID:16141072, PRO:HJD]

Yes

Yes
organism-sequence



PR:Q9UHV7-1

mediator of RNA polymerase II transcription subunit 13 isoform 1 (human)

hMED13/iso:1


"A mediator of RNA polymerase II transcription subunit 13 isoform 1 that is encoded in the genome of human." [PRO:HJD]


Back to top
MED13 forms found in complexes   

MED13 Component
Complexes
PR:Q5SWW4ZDASHZ1 mMED13/iso:1 PR:000028902 mediator complex, MED26-containing (mouse)
PR:000028957 mediator complex, CDK8-containing (mouse)
Back to top
Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q5SWW4-1 mMED13/iso:1 located_inGO:0016592 mediator complex MGI_ref:4462751; PMID:20508642