back to PRO homepage
  Home |   Linked Open Data |   Browse |  
Search

|   Statistics |   Download
 RACE-PRO
 PRO tracker
 Community
 PRO Consortium
 Publications
 Documentation

Protein Ontology report - exosome complex component RRP40
PR:000007260 - http://purl.obolibrary.org/obo/PR_000007260
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000007260   
  PRO nameexosome complex component RRP40 
  Synonyms
PRO-Short-label: EXACT:EXOSC3
Gene-based: RELATED:CGI-102 | RRP40
Other: EXACT:exosome complex exonuclease RRP40 | exosome component 3 | ribosomal RNA-processing protein 40
  Definition"A protein that is a translation product of the human EXOSC3 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 7                                        
         Sequence0                                                  Organism-Sequence 2                                        
         Modification1                                                  Organism-Modification 3                                        
  Term Hierarchy
  Visualization
DAG: OLS:
Back to top
Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000007260

exosome complex component RRP40

EXOSC3


"A protein that is a translation product of the human EXOSC3 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:O13903

exosome complex component rrp40 (Schizosaccharomyces pombe 972h-)

Spom972h-EXOSC3


"An exosome complex component RRP40 that is encoded in the genome of Schizosaccharomyces pombe 972h-." [OMA:O13903, PRO:DNx]


organism-gene



PR:Q08285

exosome complex component RRP40 (yeast)

yEXOSC3


"An exosome complex component RRP40 that is encoded in the genome of yeast." [OMA:Q08285, PRO:DNx]


organism-gene



PR:Q7KWX9

putative exosome complex component rrp40 (Dictyostelium discoideum)

Dicty-EXOSC3


"An exosome complex component RRP40 that is encoded in the genome of Dictyostelium discoideum." [OMA:Q7KWX9, PRO:DNx]


organism-gene



PR:Q7TQK4

exosome complex component RRP40 (mouse)

mEXOSC3


"An exosome complex component RRP40 that is encoded in the genome of mouse." [OMA:Q7TQK4, PRO:DNx]


organism-gene



PR:Q8IPX7

exosome complex component RRP40 (fruit fly)

fly-EXOSC3


"An exosome complex component RRP40 that is encoded in the genome of fruit fly." [OMA:Q8IPX7, PRO:DNx]


organism-gene



PR:Q93830

F59C6.4 (worm)

EXOSC3 (worm)


"An exosome complex component RRP40 that is encoded in the genome of worm." [PANTHER:PTHR21321:SF1, PRO:DNx]


organism-gene



PR:Q9NQT5

exosome complex component RRP40 (human)

hEXOSC3


"An exosome complex component RRP40 that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q9NQT5]


organism-sequence



PR:Q9NQT5-1

exosome complex component RRP40 isoform h1 (human)

hEXOSC3/iso:h1


"An exosome complex component RRP40 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9NQT5-1." [PRO:DNx, UniProtKB:Q9NQT5]


organism-sequence



PR:Q9NQT5-2

exosome complex component RRP40 isoform h2 (human)

hEXOSC3/iso:h2


"An exosome complex component RRP40 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9NQT5-2." [PRO:DNx, UniProtKB:Q9NQT5]


organism-modification



PR:000047337

exosome complex component RRP40, initiator methionine removed form (human)

hEXOSC3/InitMet-


"An exosome complex component RRP40 (human) that has had the initiator methionine removed. UniProtKB:Q9NQT5, 2-275." [PRO:DNx, Reactome:R-HSA-430017, Reactome:R-HSA-6791572]


organism-modification



PR:000071292

exosome complex component RRP40 cysteinylated 1 (human)

hEXOSC3/Cyst:1


"An exosome complex component RRP40 (human) that has been cysteinylated on the residue at the position equivalent to Cys-215 of the amino acid sequence represented by UniProtKB:Q9NQT5-1. Example: UniProtKB:Q9NQT5-1, Cys-215, MOD:00765." [IEDB_epitope:1028331, PRO:DNx]


organism-modification



PR:000081397

exosome complex component RRP40 methylated 1 (human)

hEXOSC3/Me:1


"An exosome complex component RRP40 (human) that has been methylated on the residue at the position equivalent to Cys-67 of the amino acid sequence represented by UniProtKB:Q9NQT5-1. Example: UniProtKB:Q9NQT5-1, Cys-67, MOD:00660." [IEDB_epitope:1046912, PRO:DNx]


modification



PR:000019817

exosome complex component RRP40, initiator methionine removed form

EXOSC3/InitMet-


"An exosome complex component RRP40 that has had the initiator methionine removed." [PRO:DNx]


organism-modification



PR:000047337

exosome complex component RRP40, initiator methionine removed form (human)

hEXOSC3/InitMet-


"An exosome complex component RRP40 (human) that has had the initiator methionine removed. UniProtKB:Q9NQT5, 2-275." [PRO:DNx, Reactome:R-HSA-430017, Reactome:R-HSA-6791572]