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Protein Ontology report - cell adhesion molecule 1
PR:000004960 - http://purl.obolibrary.org/obo/PR_000004960
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000004960   
  PRO namecell adhesion molecule 1 
  Synonyms
PRO-Short-label: EXACT:CADM1
Gene-based: RELATED:IGSF4 | IGSF4A | NECL2 | Ra175 | SYNCAM | SynCam1 | TSLC1
Other: EXACT:IgSF4 | immunoglobulin superfamily member 4 | NECL-2 | nectin-like protein 2 | SgIgSF | spermatogenic immunoglobulin superfamily | synaptic cell adhesion molecule | TSLC-1 | tumor suppressor in lung cancer 1
  Definition"A protein that is a translation product of the human CADM1 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence0                                                  Organism-Sequence 14                                        
         Modification0                                                  Organism-Modification 1                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  
PRO ID
Name
Short Name
Definition
Ann. Has Annotation?

Comp. In Complex?
gene


PR:000004960
cell adhesion molecule 1
CADM1
"A protein that is a translation product of the human CADM1 gene or a 1:1 ortholog thereof." [PRO:DNx]

organism-gene


PR:Q6AYP5
cell adhesion molecule 1 (rat)
rCADM1
"A cell adhesion molecule 1 that is encoded in the genome of rat." [OMA:Q6AYP5, PRO:DNx]

organism-sequence


PR:Q6AYP5-1
cell adhesion molecule 1 isoform r1 (rat)
rCADM1/iso:r1
"A cell adhesion molecule 1 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q6AYP5-1." [PRO:DNx, UniProtKB:Q6AYP5]

organism-sequence


PR:Q6AYP5-2
cell adhesion molecule 1 isoform r2 (rat)
rCADM1/iso:r2
"A cell adhesion molecule 1 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q6AYP5-2." [PRO:DNx, UniProtKB:Q6AYP5]

organism-gene


PR:Q8R5M8
cell adhesion molecule 1 (mouse)
mCADM1
"A cell adhesion molecule 1 that is encoded in the genome of mouse." [OMA:Q8R5M8, PRO:DNx]

organism-sequence


PR:Q8R5M8-1
cell adhesion molecule 1 isoform 1 (mouse)
mCADM1/iso:1
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-1." [ECO:0000006, PMID:21482734, PRO:HJD, RefSeq:NM_207675, UniProtKB:Q8R5M8]

organism-sequence


PR:Q8R5M8-2
cell adhesion molecule 1 isoform 2 (mouse)
mCADM1/iso:2
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-2." [ECO:0000006, PMID:21482734, PRO:HJD, RefSeq:NM_018770, UniProtKB:Q8R5M8]
Yes
organism-sequence


PR:Q8R5M8-3
cell adhesion molecule 1 isoform 3 (mouse)
mCADM1/iso:3
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-3." [ECO:0000006, PMID:21482734, PRO:HJD, RefSeq:NM_207676, UniProtKB:Q8R5M8]
Yes
organism-sequence


PR:Q8R5M8-4
cell adhesion molecule 1 isoform 4 (mouse)
mCADM1/iso:4
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-4." [ECO:0000006, PMID:21482734, PRO:HJD, RefSeq:NM_001025600, UniProtKB:Q8R5M8]
Yes
organism-sequence


PR:Q8R5M8-5
cell adhesion molecule 1 isoform m5 (mouse)
mCADM1/iso:m5
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-5." [PRO:DNx, UniProtKB:Q8R5M8]

organism-sequence


PR:Q8R5M8-6
cell adhesion molecule 1 isoform m6 (mouse)
mCADM1/iso:m6
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-6." [PRO:DNx, UniProtKB:Q8R5M8]

organism-sequence


PR:Q8R5M8-7
cell adhesion molecule 1 isoform m7 (mouse)
mCADM1/iso:m7
"A cell adhesion molecule 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R5M8-7." [PRO:DNx, UniProtKB:Q8R5M8]

organism-gene


PR:Q9BY67
cell adhesion molecule 1 (human)
hCADM1
"A cell adhesion molecule 1 that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q9BY67]

organism-sequence


PR:Q9BY67-1
cell adhesion molecule 1 isoform h1 (human)
hCADM1/iso:h1
"A cell adhesion molecule 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9BY67-1." [PRO:DNx, UniProtKB:Q9BY67]

organism-sequence


PR:Q9BY67-2
cell adhesion molecule 1 isoform h2 (human)
hCADM1/iso:h2
"A cell adhesion molecule 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9BY67-2." [PRO:DNx, UniProtKB:Q9BY67]

organism-sequence


PR:Q9BY67-3
cell adhesion molecule 1 isoform h3 (human)
hCADM1/iso:h3
"A cell adhesion molecule 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9BY67-3." [PRO:DNx, UniProtKB:Q9BY67]

organism-sequence


PR:Q9BY67-4
cell adhesion molecule 1 isoform h4 (human)
hCADM1/iso:h4
"A cell adhesion molecule 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9BY67-4." [PRO:DNx, UniProtKB:Q9BY67]

organism-sequence


PR:Q9BY67-5
cell adhesion molecule 1 isoform h5 (human)
hCADM1/iso:h5
"A cell adhesion molecule 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9BY67-5." [PRO:DNx, UniProtKB:Q9BY67]

organism-modification


PR:000064618
cell adhesion molecule 1, signal peptide removed form (human)
hCADM1/SigPep-
"A cell adhesion molecule 1 (human) that has had the signal peptide removed. Example: UniProtKB:Q9BY67-1, 45-442." [PRO:DNx, Reactome:R-HSA-420589]

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q8R5M8-2 mCADM1/iso:2 located_inGO:0070852 cell body fiber MGI_ref:5009720; PMID:21482734
PR:Q8R5M8-3 mCADM1/iso:3 located_inGO:0070852 cell body fiber MGI_ref:5009720; PMID:21482734
PR:Q8R5M8-4 mCADM1/iso:4 located_inGO:0043196 varicosity MGI_ref:5009720; PMID:21482734