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Protein Ontology report - transcription factor 20
PR:000003431 - http://purl.obolibrary.org/obo/PR_000003431
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000003431   
  PRO nametranscription factor 20 
  Synonyms
PRO-Short-label: EXACT:TCF20
Gene-based: RELATED:KIAA0292 | SPBP
Other: EXACT:nuclear factor SPBP | protein AR1 | SPRE-binding protein | stromelysin-1 PDGF-responsive element-binding protein | TCF-20
  Definition"A protein that is a translation product of the human TCF20 gene or a 1:1 ortholog thereof." [PRO:HJD] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 2                                        
         Sequence2                                                  Organism-Sequence 4                                        
         Modification0                                                  Organism-Modification 1                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000003431

transcription factor 20

TCF20


"A protein that is a translation product of the human TCF20 gene or a 1:1 ortholog thereof." [PRO:HJD]


organism-gene



PR:Q9EPQ8

transcription factor 20 (mouse)

mTCF20


"A transcription factor 20 that is encoded in the genome of mouse." [OMA:Q9EPQ8, PRO:DNx]


organism-sequence



PR:Q9EPQ8-1

transcription factor 20 isoform 1 (mouse)

mTCF20/iso:1


"A transcription factor 20 isoform 1 that is encoded in the genome of mouse." [PRO:HJD]

Yes

organism-sequence



PR:Q9EPQ8-2

transcription factor 20 isoform 2 (mouse)

mTCF20/iso:2


"A transcription factor 20 isoform 2 that is encoded in the genome of mouse." [PRO:HJD]

Yes

organism-gene



PR:Q9UGU0

transcription factor 20 (human)

hTCF20


"A transcription factor 20 that is encoded in the genome of human." [PRO:HJD, UniProtKB:Q9UGU0]


organism-sequence



PR:Q9UGU0-1

transcription factor 20 isoform h1 (human)

hTCF20/iso:h1


"A transcription factor 20 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UGU0-1." [PRO:DNx, UniProtKB:Q9UGU0]


organism-sequence



PR:Q9UGU0-2

transcription factor 20 isoform h2 (human)

hTCF20/iso:h2


"A transcription factor 20 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UGU0-2." [PRO:DNx, UniProtKB:Q9UGU0]


organism-modification



PR:000076315

transcription factor 20 methylated 1 (human)

hTCF20/Me:1


"A transcription factor 20 (human) that has been methylated on the residue at the position equivalent to Cys-1890 of the amino acid sequence represented by UniProtKB:Q9UGU0-1. Example: UniProtKB:Q9UGU0-1, Cys-1890, MOD:00660." [IEDB_epitope:1049022, PRO:DNx]


sequence



PR:000003432

transcription factor 20 isoform 1

TCF20/iso:1


"A transcription factor 20 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9EPQ8-1 or a 1:1 ortholog thereof." [PMID:10995766, PRO:HJD]


organism-sequence



PR:Q9EPQ8-1

transcription factor 20 isoform 1 (mouse)

mTCF20/iso:1


"A transcription factor 20 isoform 1 that is encoded in the genome of mouse." [PRO:HJD]

Yes

sequence



PR:000003434

transcription factor 20 isoform 2

TCF20/iso:2


"A transcription factor 20 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9EPQ8-2 or a 1:1 ortholog thereof." [PMID:10995766, PRO:HJD]


organism-sequence



PR:Q9EPQ8-2

transcription factor 20 isoform 2 (mouse)

mTCF20/iso:2


"A transcription factor 20 isoform 2 that is encoded in the genome of mouse." [PRO:HJD]

Yes

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q9EPQ8-1 mTCF20/iso:1 acts_upstream_of_or_withinGO:0045944 positive regulation of transcription by RNA polymerase II PMID:7760812
enablesGO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific PMID:7760812
located_inGO:0005634 nucleus PMID:7760812
PR:Q9EPQ8-2 mTCF20/iso:2 acts_upstream_of_or_withinGO:0045944 positive regulation of transcription by RNA polymerase II MGI_ref:1928403; PMID:10995766
GO:0045944 positive regulation of transcription by RNA polymerase II MGI_ref:1928403; PMID:10995766
enablesGO:0005515 protein binding with PR:Q9QZS2 mRNF4 MGI_ref:1888582; PMID:10849425
GO:0005515 protein binding with PR:Q9QZS2 mRNF4 MGI_ref:1888582; PMID:10849425
located_inGO:0005634 nucleus MGI_ref:1888582; PMID:10849425