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Protein Ontology report - lymphotoxin-alpha
PR:000002204 - http://purl.obolibrary.org/obo/PR_000002204
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000002204   
  PRO namelymphotoxin-alpha 
  Synonyms
PRO-Short-label: EXACT:LTA
Gene-based: RELATED:TNFB | TNFSF1
Other: EXACT:LT-alpha | TNF-beta | tumor necrosis factor B | tumor necrosis factor ligand superfamily member 1
  Definition"A lymphotoxin that is a translation product of the human LTA gene or a 1:1 ortholog thereof." [PRO:WCB] 
  PRO Categorygene 
  ParentPR:000050043 lymphotoxin
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence1                                                  Organism-Sequence 2                                        
         Modification2                                                  Organism-Modification 10                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
PIRSF:PIRSF500469
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000002204

lymphotoxin-alpha

LTA


"A lymphotoxin that is a translation product of the human LTA gene or a 1:1 ortholog thereof." [PRO:WCB]


organism-gene



PR:P01374

lymphotoxin-alpha (human)

hLTA


"A lymphotoxin-alpha that is encoded in the genome of human." [PRO:WCB, UniProtKB:P01374]


organism-sequence



PR:P01374-1

lymphotoxin-alpha isoform 1 (human)

hLTA/iso:1


"A lymphotoxin-alpha isoform 1 that is encoded in the genome of human." [PRO:JAN]


organism-modification



PR:000048265

lymphotoxin-alpha, signal peptide removed form (human)

hLTA/SigPep-


"A lymphotoxin-alpha (human) that has had the signal peptide removed. UniProtKB:P01374, 35-205." [PRO:DNx, Reactome:R-HSA-5667153]


organism-modification



PR:000051768

lymphotoxin-alpha N-glycosylated 1 (human)

hLTA/NGlyco:1


"A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G29228MX. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G29228MX." [GlyGen:P01374-1, PMID:8323280, PRO:DNx]


organism-modification



PR:000051769

lymphotoxin-alpha N-glycosylated 2 (human)

hLTA/NGlyco:2


"A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G45359RY. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G45359RY." [GlyGen:P01374-1, PMID:8323280, PRO:DNx]


organism-modification



PR:000051770

lymphotoxin-alpha N-glycosylated 3 (human)

hLTA/NGlyco:3


"A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G52038JM. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G52038JM." [GlyGen:P01374-1, PMID:8323280, PRO:DNx]


organism-modification



PR:000051771

lymphotoxin-alpha N-glycosylated 4 (human)

hLTA/NGlyco:4


"A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G63889NK. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G63889NK." [GlyGen:P01374-1, PMID:8323280, PRO:DNx]


organism-modification



PR:000051772

lymphotoxin-alpha N-glycosylated 5 (human)

hLTA/NGlyco:5


"A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G78059CC. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G78059CC." [GlyGen:P01374-1, PMID:8323280, PRO:DNx]


organism-modification



PR:000051773

lymphotoxin-alpha N-glycosylated 6 (human)

hLTA/NGlyco:6


"A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G86357DX. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G86357DX." [GlyGen:P01374-1, PMID:8323280, PRO:DNx]


organism-modification



PR:000066956

lymphotoxin-alpha deaminated 1 (human)

hLTA/Deam:1


"A lymphotoxin-alpha (human) that has been deaminated on the residue at the position equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374. UniProtKB:P01374, Asn-96, MOD:00684." [IEDB_epitope:838045, PRO:DNx]


organism-modification



PR:000073774

lymphotoxin-alpha methylated 1 (human)

hLTA/Me:1


"A lymphotoxin-alpha (human) that has been methylated on the residue at the position equivalent to Ser-43 of the amino acid sequence represented by UniProtKB:P01374. UniProtKB:P01374, Ser-43, MOD:01799." [IEDB_epitope:1859056, PRO:DNx]


organism-modification



PR:000074173

lymphotoxin-alpha deaminated 2 (human)

hLTA/Deam:2


"A lymphotoxin-alpha (human) that has been deaminated on the residue at the position equivalent to Gln-112 of the amino acid sequence represented by UniProtKB:P01374. UniProtKB:P01374, Gln-112, MOD:00685." [IEDB_epitope:1585188, PRO:DNx]


organism-gene



PR:P09225

lymphotoxin-alpha (mouse)

mLTA


"A lymphotoxin-alpha that is encoded in the genome of mouse." [OMA:P09225, PRO:DNx]


organism-sequence



PR:P09225-1

lymphotoxin-alpha isoform 1 (mouse)

mLTA/iso:1


"A lymphotoxin-alpha isoform 1 that is encoded in the genome of mouse." [PRO:JAN]


organism-gene



PR:Q06332

lymphotoxin-alpha (rat)

rLTA


"A lymphotoxin-alpha that is encoded in the genome of rat." [OMA:Q06332, PRO:DNx]


sequence



PR:000002331

lymphotoxin-alpha isoform 1

LTA/iso:1


"A lymphotoxin-alpha that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P09225-1 or a 1:1 ortholog thereof." [PRO:JAN]


organism-sequence



PR:P01374-1

lymphotoxin-alpha isoform 1 (human)

hLTA/iso:1


"A lymphotoxin-alpha isoform 1 that is encoded in the genome of human." [PRO:JAN]


organism-sequence



PR:P09225-1

lymphotoxin-alpha isoform 1 (mouse)

mLTA/iso:1


"A lymphotoxin-alpha isoform 1 that is encoded in the genome of mouse." [PRO:JAN]


modification



PR:000026648

lymphotoxin-alpha isoform 1, signal peptide removed form

LTA/iso:1/SigPep-


"A lymphotoxin-alpha isoform 1 that has had the signal peptide removed." [PRO:DNx]


modification



PR:000018753

lymphotoxin-alpha, signal peptide removed form

LTA/SigPep-


"A lymphotoxin-alpha that has had the signal peptide removed." [PRO:DNx]


modification



PR:000026648

lymphotoxin-alpha isoform 1, signal peptide removed form

LTA/iso:1/SigPep-


"A lymphotoxin-alpha isoform 1 that has had the signal peptide removed." [PRO:DNx]


organism-modification



PR:000048265

lymphotoxin-alpha, signal peptide removed form (human)

hLTA/SigPep-


"A lymphotoxin-alpha (human) that has had the signal peptide removed. UniProtKB:P01374, 35-205." [PRO:DNx, Reactome:R-HSA-5667153]